PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925688.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 564aa    MW: 59821.6 Da    PI: 7.3376
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925688.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.12.2e-36206299292
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssgkaa 91 
                     +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++a++ai+el+g+++s++s+      ++++   +  n+  g+++
  XP_010925688.1 206 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIRNAQAAIDELAGLPASASSSNppsalNPQETAAA--NQPVGDSS 298
                     79**************************************************************666664332222111111111..22222333 PP

             TCP  92 k 92 
                     k
  XP_010925688.1 299 K 299
                     3 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.8E-32206288IPR005333Transcription factor, TCP
PROSITE profilePS5136933.467208266IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    Send to blast
MTLWPVIVVS PSRGGGDGDG ILGVGWPSLL EAETRKAPTP APPDTTSRAA EGTREAARGS  60
RERGIPLAAN TKLDGRQKRA AKDLDPRRTP YRPIPNPRGS EREEEEGEQP QEEEQQPQRF  120
RLRPLHHHQN PPPGDRSYFP SPSSSSSSSP TTASFSDHAR PSDRMAEAEG HGYGHQRQHQ  180
RPRFVGGLRG AGEIVEVQGG HIVRSTGRKD RHSKVCTAKG PRDRRVRLSA HTAIQFYDVQ  240
DRLGYDRPSK AVDWLIRNAQ AAIDELAGLP ASASSSNPPS ALNPQETAAA NQPVGDSSKK  300
PIPGAEPVAS AAFGFGGGGG GGGGSGSFLP PSLDSDAIAD TIKSFFPMAA PAATAPSSSP  360
AIGFQNYPSD LASHASRQDL QLSLQSFQDP IFHSPDPSHH PHSQHHHQDP TPSTQHALFS  420
VSAHLAYDTA SAGWSEQSQR MVPWNVAETS CGGGGGGGGY EFNVPPPAPP QAVPLHPVLG  480
QSQFFTQRGP LQSSNSPAIR AWADPIASTT DHQMHPALRP SVSSIGFASG AGFPGFRFPA  540
RIQGEEERDG TSDKPPSASS ASHH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925688.10.0PREDICTED: transcription factor TCP4-like isoform X2
SwissprotQ8LPR51e-89TCP4_ARATH; Transcription factor TCP4
TrEMBLM0SW951e-134M0SW95_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P06660_0011e-134(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-41TCP family protein